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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905192.1_cds_XP_016455395.1_49328
CDS Infomation

[gene=LOC107779466] [db_xref=GeneID:107779466] [protein=long chain acyl-CoA synthetase 2-like] [protein_id=XP_016455395.1] [location=complement(join(14969..15016,15572..15691,15764..15946,16288..16427,16870..17115,17592..17709,17897..17972,18073..18139,18267..18354,18466..18576,19016..19180,19272..19366,19446..19485,19754..19830,19957..20005,20170..20226,20329..20418,20669..20732,21647..21792))] [gbkey=CDS]
Sequence

ATGGAAAGTTATACGGCGAAAGTTGAAGAAAGTCGACCGGCTTTTGATGGAAAGCCATCT
GCAGGGCCAGTTTATAGGTGCATTTATGCTAAAGATGGTCTCATGGACATGCCTGTTGGT
TTTGAGTCACCTTGGGATTTCTTCAGTGAATCAGTTAAGAAGAATCCCAAAAACCAAATG
CTGGGCCGCCGTCAGGTTGTTGACAAAAAGGCAGGTGCCTACAATTGGTTGACATATGAG
GAGGTTTACGAAACCACAATCAAGATTGGTTCAGCCATCCGAAGCCGTGGTGTCAATCCA
GGAGACAAATGTGGCATCTATGGTGTGAACTCTCCTGAGTGGATAATGGCAATGGAGGCT
TGTAACAGCCAAGGAATTTCATATGTACCACTCTATGATTCCCTTGGTGCAAATGCAGTG
GAATTTATCATAAACCACGCTGAAGTTTCAATAGCTTTTGCTCAAGAGAGCAAGATACCG
GCTATCTTATCATGCTTGTCAAAGTGCAGTTCTTACCTAAAAACTATCGTCAGCTTTGGA
AACATTTCCAGCACGCAGAAAAGTGAAGCAGAGGATCAAGGAGTAGCTTGCTTCTCTTGG
GATGAGTTTGTTCAAATGGGAAGTTTGAATCATGAACTTCCTCAGAAACGGAAGACTGAT
ATATGTACAATTATGTACACAAGTGGAACTACTGGAGAACCAAAAGGTGTCATTTTGACT
AATGGGGCTTTCATGGGAGAAGTTCTGTCGATGGATCAACTTCTCGCTGTAACAGACGAA
GAGGGAACAGGAGAGGACGTGTACTTTTCGTTCCTTCCACTGGCTCATATATTTGATCAA
ATAGTTGAGACATATTGCATATACAGGGGTGCTTCAATAGGATTTTGGCAAGGCGACATT
AGATACTTGATTGAGGATCTTCTGGTATTGAAGCCCACTATATTTTGTGGAGTTCCAAGA
GTTTTTGACAGGATATACACAGGTGTGATGGATAAAATTGAAGCTGGAGGTTTGTTAAAG
AAGCTGCTTTTCCGATATGCATATAACTACAAGTTAAGGAATATGGAGAAAGGACTAAGA
CAAGATGAAGCAGCTCCTCGCTTTGACAGGCTGGTTTTTGACAAGATCAAACTAGCATTT
GGTGGACGAGTTCGTCTCATGCTTTCTGGAGCTGCTCCTTTGCCCAAGCATGTCGAAGAA
TTTCTAAGGGTGACATGCTGCTGTTCTTTAGCACAAGGATATGGTCTTACTGAAAGTTGT
GGAGGATGTTTCACATCCATAGCCAATGTACAGCCCATGATAGGAACTGTTGGTGTTCCA
ATGACTACAATAGAGGCAAGACTTGAGTCCGTGCCAGAAATGGGATATGATGCGCTTGCA
AGTGTGCCACGCGGAGAAATTTGTCTGAGGGGAAAAACTTTGTTTTCGGGGTACCATAAA
CGAGAAGATCTTACAAAAGCAGTACTTGTGGATGGATGGTTTCATACAGGTGACATTGGT
GAGTTGCAGCCAGATGGAGCAATGAAAATCATTGACCGGAAAAAGAACATATTCAAGCTG
TCTCAAGGGGAGTATGTGGCTGTGGAAAGCATTGAAGGGGTATACTCCAGTTGCCCACTT
ATTACATCGATCTGGATATATGGAAATAGTTTCGAGTCCTTTTTAGTGGCCGTGGTAGTT
CCAGAAAGAAAAGCACTGGAAGACTGGGCTTCAAGTAATCAGGAAACTGGAGATTTTTCA
GCTCTATGCAATAACTCAACGGCGAGGAAGTACATTTTGGATGAACTCAACAGCACTGCC
AAGAAACACCAACTTCGAGGTTTTGAAATGTTACGTGCAGTCCATTTGGAGCCAAATCCT
TTTGACATTGAGAGAGATTTAGTTACTCCAACGTTCAAACTAAAAAGGCCACAGCTGCTC
AACCATTACAAGGACATTGTCGATCAACTTTACAAAGAAGGTAATGCAAAAACTGCATAG

Peptide Sequence

PEP ID

XP_016455395.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 2-like [Nicotiana tabacum]
Sequence

MESYTAKVEESRPAFDGKPSAGPVYRCIYAKDGLMDMPVGFESPWDFFSESVKKNPKNQM
LGRRQVVDKKAGAYNWLTYEEVYETTIKIGSAIRSRGVNPGDKCGIYGVNSPEWIMAMEA
CNSQGISYVPLYDSLGANAVEFIINHAEVSIAFAQESKIPAILSCLSKCSSYLKTIVSFG
NISSTQKSEAEDQGVACFSWDEFVQMGSLNHELPQKRKTDICTIMYTSGTTGEPKGVILT
NGAFMGEVLSMDQLLAVTDEEGTGEDVYFSFLPLAHIFDQIVETYCIYRGASIGFWQGDI
RYLIEDLLVLKPTIFCGVPRVFDRIYTGVMDKIEAGGLLKKLLFRYAYNYKLRNMEKGLR
QDEAAPRFDRLVFDKIKLAFGGRVRLMLSGAAPLPKHVEEFLRVTCCCSLAQGYGLTESC
GGCFTSIANVQPMIGTVGVPMTTIEARLESVPEMGYDALASVPRGEICLRGKTLFSGYHK
REDLTKAVLVDGWFHTGDIGELQPDGAMKIIDRKKNIFKLSQGEYVAVESIEGVYSSCPL
ITSIWIYGNSFESFLVAVVVPERKALEDWASSNQETGDFSALCNNSTARKYILDELNSTA
KKHQLRGFEMLRAVHLEPNPFDIERDLVTPTFKLKRPQLLNHYKDIVDQLYKEGNAKTA

Transcript Sequence

Gene sequence data has not been registered.